Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
97
ChIP-seq
3
WGBS
2
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
97
DNA binding
3
DNA accessibility
3
DNA methylation
Target of assay
68
transcription factor
25
control
15
RNA binding protein
10
chromatin remodeller
2
histone
2
histone modification
2
narrow histone mark
Date released
27
December, 2018
23
October, 2018
18
August, 2017
18
January, 2019
16
November, 2018
1
August, 2018
1
October, 2017
Available data
639
bam
604
bigWig
425
tsv
243
bed narrowPeak
168
bigBed narrowPeak
104
fastq
84
bed bed3+
81
bed broadPeak
80
bigBed broadPeak
64
xls
62
txt
8
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
5
csv
1
bedpe bed3+
1
hic
Organism
104
Homo sapiens
Biosample type
60
cell line
43
tissue
1
in vitro differentiated cells
Organ
471
pancreas
383
liver
257
epithelium
101
connective tissue
60
blood
60
bodily fluid
44
adipose tissue
27
embryo
24
spleen
21
brain
6
vasculature
3
blood vessel
2
musculature of body
0
kidney
Project
104
AMP
Genome assembly (visualization)
77
GRCh38
75
hg19
Lab
104
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
12
missing controlled_by
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
104 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
cell line
GM12878
60
tissue
omental fat pad
11
1
1
subcutaneous adipose tissue
12
1
white adipose tissue
12
adipose tissue
2
3
in vitro differentiated cells
white fat cell
1
Download