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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
8
DNA binding
3
DNA accessibility
Target of assay
histone
10
histone modification
6
broad histone mark
5
control
4
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
6
November, 2017
3
October, 2017
2
November, 2018
Available data
77
bam
56
bigWig
36
bed narrowPeak
36
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
26
tsv
19
tagAlign
11
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
11
Homo sapiens
Biosample type
6
primary cell
5
tissue
Organ
421
liver
371
pancreas
206
epithelium
75
connective tissue
59
blood
59
bodily fluid
43
adipose tissue
18
spleen
15
embryo
11
brain
4
vasculature
2
blood vessel
2
musculature of body
Project
11
AMP
Genome assembly (visualization)
8
hg19
6
GRCh38
Lab
11
AMP-T2D consortium
organ_slims!
eye
target.investigated_as!
histone
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
DNase-seq
ATAC-seq
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
tissue
brain
2
2
cerebellum (Hemisphere)
1
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