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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ChIP-seq
Assay category
28
DNA binding
Target of assay
51
histone
51
histone modification
28
narrow histone mark
23
broad histone mark
17
control
4
RNA binding protein
4
transcription factor
1
chromatin remodeller
Date released
11
September, 2018
8
August, 2017
7
December, 2017
2
November, 2017
Available data
49
bam
48
bed narrowPeak
48
bigWig
28
fastq
15
bigBed narrowPeak
3
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
28
Homo sapiens
Biosample type
21
primary cell
7
in vitro differentiated cells
Organ
48
pancreas
28
epithelium
19
liver
13
connective tissue
8
embryo
4
brain
2
spleen
2
vasculature
1
adipose tissue
1
blood
1
blood vessel
1
bodily fluid
Project
28
AMP
Genome assembly (visualization)
28
GRCh38
28
hg19
Lab
28
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
5
inconsistent control read length
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
primary cell
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
brain microvascular endothelial cell
1
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in vitro differentiated cells
hepatocyte
5
Hepatic endoderm
2
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