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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 232total RNA-seq
  • 134single cell RNA-seq
  • 7ChIP-seq
Assay category
  • 366Transcription
  • 7DNA binding
Target of assay
  • 6histone
  • 6histone modification
  • 4broad histone mark
  • 2narrow histone mark
  • 1control
Date released
  • 96August, 2017
  • 76February, 2023
  • 50July, 2018
  • 44April, 2018
  • 38September, 2020
  • 27September, 2018
  • 15February, 2018
  • 12February, 2021
  • 6May, 2022
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
  • 1November, 2018
Available data
  • 1478tsv
  • 1342bam
  • 1337bigWig
  • 373fastq
  • 157txt
  • 52zippedFastqFolder
  • 8csv
  • 7tagAlign
  • 6bed broadPeak
  • 6bed narrowPeak
  • 6bigBed narrowPeak
  • 2bed bed3+
Organism
  • 366Homo sapiens
Biosample type
  • 248primary cell
  • 110tissue
  • 15in vitro differentiated cells
Organ
  • 260pancreas
  • 147epithelium
  • 4embryo
  • 3connective tissue
Project
  • 247AMP
  • 126HPAP
Genome assembly (visualization)
  • 238GRCh38
  • 238hg19
Lab
  • 241AMP-T2D consortium
  • 126Klaus Kaestner, Upenn
  • 6Kyle Gaulton, UCSD
Audit category:
  • 7inconsistent ontology term
Audit category:
  • 1inconsistent assembly
replicates.library.nucleic_acid_term_name!
  • DNA
BIOSAMPLE
ASSAY

373 results

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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
primary cell
pancreatic alpha cell5212
exocrine cell39
Langerhans cell34
pancreatic beta cell2112
pancreatic acinar cell49
tissue
islet of Langerhans976
pancreas7
in vitro differentiated cells
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
endocrine cell2
posterior foregut2
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