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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 89ChIP-seq
Assay category
  • 89DNA binding
Target of assay
  • 454transcription factor
  • 230histone modification
  • 229histone
  • 168control
  • 118broad histone mark
  • 110narrow histone mark
  • 89RNA binding protein
  • 82recombinant protein
  • 36chromatin remodeller
  • 5other context
  • 5other post-translational modification
Date released
  • 37November, 2017
  • 21November, 2018
  • 11October, 2018
  • 8August, 2017
  • 6January, 2019
  • 4December, 2017
  • 2December, 2018
Available data
  • 106bigWig
  • 105bed narrowPeak
  • 103bam
  • 93bigBed narrowPeak
  • 89fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 89Homo sapiens
Biosample type
  • 63cell line
  • 15tissue
  • 6in vitro differentiated cells
  • 5primary cell
Organ
  • 57liver
  • 10blood
  • 10bodily fluid
  • 9connective tissue
  • 8pancreas
  • 5adipose tissue
  • 4epithelium
  • 3brain
  • 2vasculature
  • 1blood vessel
Project
  • 89AMP
Genome assembly (visualization)
  • 86hg19
  • 82GRCh38
Lab
  • 89AMP-T2D consortium
Audit category:
  • 3missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
BIOSAMPLE
ASSAY

89 results

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Clear Filters
ChIP-seq
cell line
HepG253
GM1287810
tissue
body of pancreas5
omental fat pad3
islet of Langerhans2
subcutaneous adipose tissue2
liver1
in vitro differentiated cells
adipocyte4
hepatocyte2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
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