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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 118ChIP-seq
Assay category
  • 118DNA binding
Target of assay
  • 454transcription factor
  • 230histone modification
  • 229histone
  • 168control
  • 118broad histone mark
  • 110narrow histone mark
  • 89RNA binding protein
  • 82recombinant protein
  • 36chromatin remodeller
  • 5other context
  • 5other post-translational modification
Date released
  • 49August, 2017
  • 17September, 2018
  • 15December, 2017
  • 11October, 2018
  • 8February, 2018
  • 8November, 2017
  • 6October, 2017
  • 4January, 2019
Available data
  • 427bigWig
  • 420bed narrowPeak
  • 378bam
  • 242bigBed narrowPeak
  • 147tagAlign
  • 118fastq
  • 36bed broadPeak
  • 16bigBed broadPeak
  • 12bed bed3+
Organism
  • 114Homo sapiens
Biosample type
  • 45tissue
  • 33primary cell
  • 31in vitro differentiated cells
  • 8cell line
  • 1stem cell
Organ
  • 52pancreas
  • 25liver
  • 23epithelium
  • 12connective tissue
  • 6brain
  • 4embryo
  • 4spleen
Project
  • 118AMP
Genome assembly (visualization)
  • 117hg19
  • 116GRCh38
Lab
  • 118AMP-T2D consortium
Audit category:
  • 25missing controlled_by
Audit category:
  • 15inconsistent control read length
  • 2inconsistent assembly
BIOSAMPLE
ASSAY

118 results

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Clear Filters
ChIP-seq
tissue
body of pancreas11
pancreas8
liver7
brain6
islet of Langerhans6
primary cell
pancreatic endocrine cell11
pancreatic ductal cell6
skeletal muscle myoblast6
pancreatic acinar cell4
pancreatic alpha cell3
in vitro differentiated cells
adipocyte12
hepatocyte7
pancreatic endoderm4
definitive endodermal cell2
primitive gut cell2
cell line
HepG28
stem cell
hESC1
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