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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
1
FAIRE-seq
Assay category
4
3D chromatin structure
1
DNA accessibility
Date released
3
July, 2019
2
October, 2019
Available data
2455
bam
2293
bigWig
1337
tsv
1252
bed narrowPeak
648
bigBed narrowPeak
634
fastq
247
tagAlign
230
bed bed3+
218
bed broadPeak
207
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Organ
liver
3
blood vessel
3
brain
3
epithelium
3
vasculature
1
connective tissue
1
pancreas
1
vein
Project
5
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent assembly
month_released!
August, 2017
organ_slims!
liver
BIOSAMPLE
ASSAY
5 results
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Hi-C
FAIRE-seq
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
endothelial cell of umbilical vein
1
cell line
Panc1
1
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