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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
July, 2019
1
October, 2019
Available data
2667
bam
2493
bigWig
1715
bed narrowPeak
1201
fastq
1012
tsv
1009
bigBed narrowPeak
368
tagAlign
312
bed broadPeak
276
bigBed broadPeak
243
bed bed3+
153
zippedFastqFolder
72
txt
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
5
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
connective tissue
1
liver
1
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent assembly
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
month_released!
February, 2021
September, 2017
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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