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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 3Hi-C
Assay category
  • 33D chromatin structure
Date released
  • 2July, 2019
  • 1October, 2019
Available data
  • 3207bam
  • 3014bigWig
  • 1684bed narrowPeak
  • 1532tsv
  • 1352fastq
  • 959bigBed narrowPeak
  • 392tagAlign
  • 305bed broadPeak
  • 268bigBed broadPeak
  • 260bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 34bed bedMethyl
  • 34bigBed bedMethyl
  • 21bedpe bed3+
  • 20hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 3cool
  • 3hdf5
  • 3tar
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 3Homo sapiens
Biosample type
  • 2primary cell
  • 1cell line
Organ
  • 3brain
  • 2blood vessel
  • 2epithelium
  • vasculature
  • 1connective tissue
  • 1liver
  • 1pancreas
Project
  • 3AMP
Genome assembly (visualization)
  • 3hg19
  • 1GRCh38
Lab
  • 3AMP-T2D consortium
Audit category:
  • 1inconsistent assembly
organ_slims!
  • vasculature
BIOSAMPLE
ASSAY

3 results

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Hi-C
primary cell
astrocyte of the cerebellum1
brain pericyte1
cell line
Panc11
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