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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
Hi-C
1
FAIRE-seq
Assay category
7
3D chromatin structure
1
DNA accessibility
Date released
3
October, 2022
2
March, 2020
2
October, 2019
1
November, 2019
Available data
471
bam
428
bigWig
263
bed narrowPeak
257
fastq
224
tsv
138
bigBed narrowPeak
80
zippedFastqFolder
27
bed broadPeak
27
bigBed broadPeak
26
bed bed3+
13
tagAlign
7
bed bedMethyl
7
bigBed bedMethyl
7
hic
6
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
8
Homo sapiens
Biosample type
6
primary cell
1
cell line
1
tissue
Organ
7
epithelium
7
pancreas
5
liver
4
blood vessel
4
vasculature
3
heart
3
vein
2
musculature of body
1
kidney
0
adrenal gland
Project
5
AMP
3
HPAP
Genome assembly (visualization)
8
hg19
Lab
5
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
4
audit script error
1
inconsistent ontology term
BIOSAMPLE
ASSAY
8 results
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Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
1
tissue
aorta
1
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