Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
Hi-C
Assay category
14
3D chromatin structure
Date released
7
March, 2020
2
August, 2021
2
October, 2019
1
March, 2019
1
March, 2023
1
November, 2019
Available data
2865
bam
2645
bigWig
1475
bed narrowPeak
1276
tsv
1101
fastq
872
bigBed narrowPeak
385
tagAlign
270
bed broadPeak
233
bigBed broadPeak
222
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
22
bed bedMethyl
22
bigBed bedMethyl
15
bedpe bed3+
14
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
14
Homo sapiens
Biosample type
8
tissue
4
in vitro differentiated cells
1
cell line
1
primary cell
Organ
7
pancreas
epithelium
3
blood vessel
heart
3
vasculature
2
liver
2
musculature of body
2
vein
1
kidney
Project
13
AMP
1
ITG
Genome assembly (visualization)
13
hg19
1
GRCh38
Lab
10
AMP-T2D consortium
2
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
4
inconsistent ontology term
organ_slims!
epithelium
heart
stomach
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
kidney
1
liver
1
+ See 1 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
HepG2
1
primary cell
chondrocytes
1
See all biosamples
Download