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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 6Hi-C
Assay category
  • 63D chromatin structure
Date released
  • 3October, 2022
  • 1March, 2020
  • 1November, 2019
  • 1October, 2019
Available data
  • 317bam
  • 301bigWig
  • 257fastq
  • 156tsv
  • 151bed narrowPeak
  • 80zippedFastqFolder
  • 76bigBed narrowPeak
  • 22bed broadPeak
  • 22bigBed broadPeak
  • 21bed bed3+
  • 7tagAlign
  • 6bed bedMethyl
  • 6bigBed bedMethyl
  • 6hic
  • 5bedpe bed3+
  • 3cool
  • 2hdf5
  • 1tar
Organism
  • 6Homo sapiens
Biosample type
  • 5primary cell
  • 1cell line
Organ
  • 7pancreas
  • 6epithelium
  • 3blood vessel
  • 3heart
  • 3vasculature
  • 2liver
  • 2musculature of body
  • 2vein
  • 1kidney
Project
  • 3AMP
  • 3HPAP
Genome assembly (visualization)
  • 6hg19
Lab
  • 3AMP-T2D consortium
  • 3Klaus Kaestner, Upenn
Audit category:
  • 4audit script error
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

6 results

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Hi-C
primary cell
endothelial cell of umbilical vein2
pancreatic acinar cell1
pancreatic alpha cell1
pancreatic beta cell1
cell line
EndoC_BH11
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