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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 7Hi-C
Assay category
  • 73D chromatin structure
Date released
  • 3October, 2022
  • 2November, 2019
  • 1March, 2019
  • 1March, 2020
Available data
  • 689bam
  • 623bigWig
  • 471fastq
  • 417tsv
  • 214bed narrowPeak
  • 91bigBed narrowPeak
  • 80zippedFastqFolder
  • 29bed bed3+
  • 21bed broadPeak
  • 19tagAlign
  • 7bedpe bed3+
  • 7bigBed broadPeak
  • 7hic
  • 6bed bedMethyl
  • 6bigBed bedMethyl
  • 6txt
  • 3cool
  • 1bedpe
  • 1hdf5
Organism
  • 7Homo sapiens
Biosample type
  • 3primary cell
  • 3tissue
  • 1cell line
Organ
  • 7pancreas
  • 6epithelium
  • 3blood vessel
  • 3heart
  • 3vasculature
  • 2liver
  • 2musculature of body
  • 2vein
  • 1kidney
Project
  • 4AMP
  • 3HPAP
Genome assembly (visualization)
  • 7hg19
Lab
  • 3AMP-T2D consortium
  • 3Klaus Kaestner, Upenn
  • 1Bing Ren, UCSD
Audit category:
  • 3audit script error
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

7 results

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Hi-C
primary cell
pancreatic acinar cell1
pancreatic alpha cell1
pancreatic beta cell1
tissue
islet of Langerhans2
pancreas1
cell line
EndoC_BH11
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