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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
pCHi-C
1
whole genome sequencing assay
Assay category
1
DNA sequencing
Date released
2
March, 2020
1
August, 2021
Available data
3174
bam
2959
bigWig
1607
bed narrowPeak
1600
tsv
1358
fastq
832
bigBed narrowPeak
398
tagAlign
161
txt
153
zippedFastqFolder
bed broadPeak
98
bigBed broadPeak
86
bed bed3+
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
Organ
1
liver
Project
3
AMP
Genome assembly (visualization)
2
hg19
Lab
2
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
files.file_type!
bed broadPeak
month_released!
June, 2019
BIOSAMPLE
ASSAY
3 results
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pCHi-C
whole genome sequencing assay
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
HepG2
1
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