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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
Assay category
40
DNA binding
Target of assay
74
histone
74
histone modification
broad histone mark
30
narrow histone mark
10
control
Date released
31
August, 2017
7
November, 2017
2
October, 2017
Available data
bam
2472
bigWig
1405
tsv
1370
bed narrowPeak
1071
fastq
800
bigBed narrowPeak
286
bed broadPeak
269
bigBed broadPeak
261
bed bed3+
201
tagAlign
161
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
40
Homo sapiens
Biosample type
34
tissue
6
in vitro differentiated cells
Organ
10
connective tissue
9
brain
9
liver
7
musculature of body
5
pancreas
4
adipose tissue
Project
40
AMP
Genome assembly (visualization)
9
hg19
Lab
40
AMP-T2D consortium
files.file_type!
bam
lab.title!
Klaus Kaestner, Upenn
month_released!
May, 2020
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
40 results
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ChIP-seq
tissue
liver
9
skeletal muscle tissue
7
islet of Langerhans
5
cingulate gyrus
4
subcutaneous abdominal adipose tissue
4
+ See 3 more…
in vitro differentiated cells
adipocyte
6
See all biosamples
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