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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
Assay category
89
DNA binding
Target of assay
55
histone
55
histone modification
38
narrow histone mark
30
control
17
broad histone mark
4
transcription factor
Date released
50
May, 2020
20
August, 2017
12
November, 2017
6
February, 2021
1
August, 2021
Available data
912
bam
861
bigWig
645
bed narrowPeak
465
bigBed narrowPeak
465
fastq
342
tsv
97
bed broadPeak
97
bigBed broadPeak
92
tagAlign
bed bed3+
11
bed bedMethyl
11
bigBed bedMethyl
7
hic
6
bedpe bed3+
4
tar
1
bed bed3
1
csv
1
hdf5
1
vcf
Organism
89
Homo sapiens
Biosample type
70
tissue
18
cell line
1
primary cell
Organ
118
brain
83
liver
22
connective tissue
19
pancreas
15
musculature of body
8
adipose tissue
6
artery
6
blood vessel
6
heart
6
vasculature
4
epithelium
1
pituitary gland
0
vein
Project
89
AMP
Genome assembly (visualization)
43
hg19
32
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
11
inconsistent control read length
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
89 results
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Clear Filters
ChIP-seq
tissue
liver
70
cell line
HepG2
12
smooth muscle cell of the coronary artery
6
primary cell
hepatocyte
1
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