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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
147
ChIP-seq
Assay category
147
DNA binding
Target of assay
294
histone
294
histone modification
147
broad histone mark
147
narrow histone mark
48
control
9
transcription factor
Date released
45
August, 2017
44
May, 2021
41
November, 2017
10
October, 2017
7
August, 2021
Available data
427
bigWig
420
bed narrowPeak
378
bam
242
bigBed narrowPeak
147
tagAlign
118
fastq
36
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
0
tsv
Organism
143
Homo sapiens
Biosample type
76
tissue
51
primary cell
14
in vitro differentiated cells
6
cell line
Organ
45
brain
18
liver
12
connective tissue
8
musculature of body
8
pancreas
4
adipose tissue
1
epithelium
Project
103
AMP
44
T1D
Genome assembly (visualization)
102
GRCh38
85
hg19
Lab
103
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
2
inconsistent assembly
month_released!
May, 2020
BIOSAMPLE
ASSAY
147 results
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ChIP-seq
tissue
liver
11
brain
10
caudate nucleus
8
layer of hippocampus
8
skeletal muscle tissue
8
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primary cell
monocyte
44
skeletal muscle myoblast
6
hepatocyte
1
in vitro differentiated cells
adipocyte
8
neural progenitor cell
6
cell line
HepG2
6
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