Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
493
total RNA-seq
6
WGBS
5
single cell RNA-seq
3
snDrop-seq
2
ChIP-seq
Assay category
498
Transcription
6
DNA methylation
2
DNA binding
Target of assay
1
control
1
transcription factor
Date released
509
February, 2021
263
May, 2021
239
May, 2020
174
August, 2017
164
July, 2018
145
August, 2021
78
November, 2017
65
October, 2019
63
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
23
February, 2020
20
November, 2019
16
February, 2023
15
February, 2018
14
October, 2017
9
December, 2019
5
January, 2019
4
November, 2020
3
August, 2018
3
June, 2018
2
October, 2018
Available data
507
tsv
506
bam
495
bigWig
89
txt
45
fastq
11
bed narrowPeak
6
csv
4
bed bedgraph
2
bed bed3
2
bed bed3+
2
tagAlign
Organism
509
Homo sapiens
Biosample type
452
tissue
28
cell line
22
in vitro differentiated cells
7
primary cell
Organ
449
connective tissue
386
adipose tissue
artery
58
blood vessel
58
bone element
58
heart
58
vasculature
32
epithelium
32
pancreas
8
kidney
Project
503
AMP
6
HPAP
Genome assembly (visualization)
494
GRCh38
494
hg19
Lab
503
AMP-T2D consortium
6
Klaus Kaestner, Upenn
Audit category:
44
inconsistent ontology term
5
audit script error
organ_slims!
artery
BIOSAMPLE
ASSAY
509 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
WGBS
single cell RNA-seq
snDrop-seq
ChIP-seq
tissue
adipose tissue
381
bone tissue
58
kidney
5
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
+ See 3 more…
cell line
EndoC_BH1
26
iPSC derived cell line
2
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
primary cell
pancreatic alpha cell
6
osteoblast
1
See all biosamples
Download