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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
13
ChIP-seq
Assay category
41
DNA methylation
39
DNA accessibility
13
DNA binding
Target of assay
9
histone
9
histone modification
5
narrow histone mark
4
broad histone mark
3
control
1
transcription factor
Date released
80
May, 2022
10
August, 2017
3
May, 2021
Available data
689
bam
623
bigWig
471
fastq
417
tsv
214
bed narrowPeak
bigBed narrowPeak
80
zippedFastqFolder
29
bed bed3+
21
bed broadPeak
19
tagAlign
7
bedpe bed3+
7
bigBed broadPeak
7
hic
6
bed bedMethyl
6
bigBed bedMethyl
6
txt
3
cool
1
bedpe
1
hdf5
Organism
92
Homo sapiens
Biosample type
80
primary cell
10
tissue
3
in vitro differentiated cells
Organ
93
pancreas
87
epithelium
77
liver
67
brain
22
connective tissue
15
musculature of body
8
adipose tissue
6
artery
6
blood vessel
6
heart
6
vasculature
1
pituitary gland
Project
80
HPAP
13
AMP
Genome assembly (visualization)
8
hg19
2
GRCh38
Lab
80
Klaus Kaestner, Upenn
13
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
93 results
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Clear Filters
WGBS
ATAC-seq
ChIP-seq
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
tissue
islet of Langerhans
9
pancreas
1
in vitro differentiated cells
pancreatic PP cell
3
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