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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
Assay category
69
DNA binding
Target of assay
321
histone
histone modification
174
narrow histone mark
147
broad histone mark
65
control
4
transcription factor
Date released
23
May, 2020
11
August, 2017
11
November, 2017
9
October, 2019
8
August, 2021
February, 2021
5
May, 2021
2
October, 2017
Available data
2035
bam
1749
bigWig
1083
fastq
1041
tsv
943
bed narrowPeak
651
bigBed narrowPeak
257
bed broadPeak
255
bigBed broadPeak
246
bed bed3+
153
zippedFastqFolder
72
txt
69
tagAlign
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
10
bed bed3
5
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
vcf
Organism
68
Homo sapiens
Biosample type
52
tissue
14
in vitro differentiated cells
2
primary cell
1
cell line
Organ
28
liver
19
brain
4
pancreas
3
connective tissue
3
epithelium
2
musculature of body
1
adipose tissue
Project
69
AMP
Genome assembly (visualization)
6
hg19
4
GRCh38
Lab
69
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
February, 2021
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
tissue
liver
26
brain
2
caudate nucleus
2
cingulate gyrus
2
layer of hippocampus
2
+ See 15 more…
in vitro differentiated cells
neural progenitor cell
7
cardiomyocytes
3
adipocyte
2
pancreatic PP cell
2
primary cell
hepatocyte
1
skeletal muscle myoblast
1
cell line
HepG2
1
See all biosamples
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