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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
total RNA-seq
6
single cell RNA-seq
Assay category
66
Transcription
Date released
52
February, 2021
6
August, 2021
5
July, 2019
3
February, 2020
March, 2020
Available data
179
bam
149
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
66
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
hic
1
tar
Organism
66
Homo sapiens
Biosample type
52
cell line
12
tissue
2
primary cell
Organ
476
connective tissue
411
pancreas
400
adipose tissue
172
liver
163
heart
153
epithelium
66
blood vessel
66
vasculature
58
artery
58
bone element
24
brain
22
kidney
14
embryo
7
limb
6
musculature of body
5
eye
5
nerve
1
pericardium
1
spinal cord
Project
66
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
66
AMP-T2D consortium
lab.title!
Kyle Gaulton, UCSD
month_released!
March, 2020
BIOSAMPLE
ASSAY
66 results
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total RNA-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
4
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
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primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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