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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
single cell RNA-seq
6
total RNA-seq
2
pCHi-C
Assay category
12
Transcription
Date released
6
August, 2021
3
July, 2019
3
March, 2020
2
February, 2020
Available data
128
bam
102
bigWig
90
bed narrowPeak
87
bigBed narrowPeak
27
fastq
14
tsv
12
bed broadPeak
12
bigBed broadPeak
10
bed bed3+
3
bed bedMethyl
3
bigBed bedMethyl
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
14
Homo sapiens
Biosample type
14
tissue
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
14
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
14
AMP-T2D consortium
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
heart
BIOSAMPLE
ASSAY
14 results
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single cell RNA-seq
total RNA-seq
pCHi-C
tissue
aorta
4
1
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
spleen
1
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