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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
total RNA-seq
1
pCHi-C
Assay category
66
Transcription
Date released
52
February, 2021
August, 2021
5
July, 2019
4
February, 2020
4
February, 2023
2
March, 2020
Available data
187
bam
162
bed narrowPeak
156
bigWig
85
bigBed narrowPeak
67
tsv
17
bed broadPeak
17
bigBed broadPeak
15
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
67
Homo sapiens
Biosample type
52
cell line
13
tissue
2
primary cell
Organ
478
connective tissue
416
pancreas
401
adipose tissue
165
liver
156
epithelium
76
heart
62
blood vessel
62
vasculature
58
bone element
56
artery
26
brain
24
kidney
9
musculature of body
7
limb
6
embryo
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
67
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
67
AMP-T2D consortium
month_released!
August, 2021
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
retina
3
aorta
1
1
ascending aorta
2
pigmented layer of retina
2
thoracic aorta
2
+ See 2 more…
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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