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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
6
single cell RNA-seq
1
pCHi-C
Assay category
64
Transcription
Date released
52
February, 2021
6
August, 2021
5
July, 2019
February, 2020
2
March, 2020
Available data
180
bam
150
bigWig
129
bed narrowPeak
79
bigBed narrowPeak
65
tsv
13
bed broadPeak
13
bigBed broadPeak
11
bed bed3+
6
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
65
Homo sapiens
Biosample type
52
cell line
11
tissue
2
primary cell
Organ
476
connective tissue
414
pancreas
399
adipose tissue
173
liver
165
heart
154
epithelium
65
blood vessel
65
vasculature
58
bone element
56
artery
24
kidney
14
brain
14
embryo
7
musculature of body
4
eye
4
limb
4
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
65
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
65
AMP-T2D consortium
month_released!
February, 2020
October, 2018
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
65 results
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total RNA-seq
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
pulmonary artery
2
thoracic aorta
2
ascending aorta
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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