Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
total RNA-seq
4
small RNA-seq
3
single cell RNA-seq
2
pCHi-C
Assay category
24
Transcription
Target of assay
3
control
Date released
12
February, 2020
11
July, 2019
2
March, 2020
1
October, 2019
Available data
138
bam
116
bigWig
97
bed narrowPeak
94
bigBed narrowPeak
64
tagAlign
39
bed broadPeak
35
bed bed3+
35
bigBed broadPeak
26
tsv
17
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
26
Homo sapiens
Biosample type
23
tissue
3
primary cell
Organ
476
connective tissue
401
adipose tissue
264
pancreas
174
liver
168
heart
123
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
26
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
26
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2018
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
26 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
single cell RNA-seq
pCHi-C
tissue
frontal cortex
2
1
Ammon's horn
1
1
cerebellum
2
cerebellum (Hemisphere)
1
1
diencephalon
1
1
+ See 11 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
See all biosamples
Download