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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 545total RNA-seq
  • 6WGBS
  • 5single cell RNA-seq
  • 3snDrop-seq
Assay category
  • 550Transcription
  • 6DNA methylation
Date released
  • 559February, 2021
  • 189May, 2020
  • 173May, 2021
  • 164July, 2018
  • 123August, 2021
  • 89August, 2017
  • 65July, 2019
  • 49April, 2018
  • 45March, 2020
  • 26September, 2018
  • 25February, 2020
  • 20November, 2019
  • 16February, 2023
  • 16October, 2019
  • 15February, 2018
  • 9December, 2019
  • 5January, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
Available data
  • 572bam
  • 559tsv
  • 551bigWig
  • 89txt
  • 45fastq
  • 23bed narrowPeak
  • 8tagAlign
  • 6csv
  • 4bed bedgraph
  • 2bed bed3
  • 2bed bed3+
Organism
  • 559Homo sapiens
Biosample type
  • 452tissue
  • 78cell line
  • 22in vitro differentiated cells
  • 7primary cell
Organ
  • 449connective tissue
  • 386adipose tissue
  • 58bone element
  • 52artery
  • 52blood vessel
  • 52heart
  • 52vasculature
  • 32epithelium
  • 32pancreas
  • 8kidney
Project
  • 553AMP
  • 6HPAP
Genome assembly (visualization)
  • 545GRCh38
  • 545hg19
Lab
  • 553AMP-T2D consortium
  • 6Klaus Kaestner, Upenn
Audit category:
  • 44inconsistent ontology term
  • 5audit script error
BIOSAMPLE
ASSAY

559 results

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Clear Filters
total RNA-seq
WGBS
single cell RNA-seq
snDrop-seq
tissue
adipose tissue381
bone tissue58
kidney5
visceral abdominal adipose tissue3
subcutaneous adipose tissue2
cell line
smooth muscle cell of the coronary artery52
EndoC_BH126
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)18
adipocyte4
primary cell
pancreatic alpha cell6
osteoblast1
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