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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
119
total RNA-seq
37
single cell RNA-seq
2
ATAC-seq
1
pCHi-C
Assay category
156
Transcription
2
DNA accessibility
Date released
153
July, 2018
89
August, 2017
40
May, 2021
39
April, 2018
32
February, 2021
26
September, 2018
20
November, 2019
6
March, 2020
4
July, 2019
3
August, 2018
2
October, 2018
1
August, 2021
1
February, 2020
June, 2018
Available data
163
bigWig
159
bam
159
tsv
39
fastq
3
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
159
Homo sapiens
Biosample type
119
tissue
37
primary cell
3
cell line
Organ
159
pancreas
36
epithelium
5
heart
4
connective tissue
3
musculature of body
2
blood vessel
2
brain
2
intestine
2
kidney
2
liver
2
vasculature
1
adipose tissue
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
157
AMP
2
T1D
Genome assembly (visualization)
158
hg19
156
GRCh38
Lab
159
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
month_released!
June, 2018
BIOSAMPLE
ASSAY
159 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
116
1
pancreas
1
1
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic ductal cell
3
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cell line
EndoC_BH1
2
1
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