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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 30pCHi-C
  • 13total RNA-seq
  • 2ATAC-seq
Assay category
  • 13Transcription
  • 2DNA accessibility
Date released
  • 559February, 2021
  • 189May, 2020
  • 173May, 2021
  • 164July, 2018
  • 123August, 2021
  • 89August, 2017
  • 65July, 2019
  • 49April, 2018
  • 45March, 2020
  • 26September, 2018
  • 25February, 2020
  • 20November, 2019
  • 16February, 2023
  • 16October, 2019
  • 15February, 2018
  • 9December, 2019
  • 5January, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
  • 1July, 2025
Available data
  • 45tsv
  • 20bigWig
  • 16bam
  • 12bedpe bed3+
  • 10hic
  • 3bed narrowPeak
  • 2ibed
Organism
  • 45Homo sapiens
Biosample type
  • 28tissue
  • 9cell line
  • 4in vitro differentiated cells
  • 4stem cell
Organ
  • 6pancreas
  • 5heart
  • 3epithelium
  • 3musculature of body
  • 2blood vessel
  • 2brain
  • 2connective tissue
  • 2intestine
  • 2kidney
  • 2liver
  • 2vasculature
  • 1adipose tissue
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1ovary
  • 1small intestine
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
Project
  • 43AMP
  • 2T1D
Genome assembly (visualization)
  • 15hg19
  • 13GRCh38
Lab
  • 45AMP-T2D consortium
Audit category:
  • 11inconsistent ontology term
BIOSAMPLE
ASSAY

45 results

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Clear Filters
pCHi-C
total RNA-seq
ATAC-seq
tissue
psoas muscle12
aorta11
heart left ventricle11
heart right ventricle11
liver11
pancreas11
Ammon's horn1
adipose tissue1
adrenal gland1
bladder (urinary bladder)1
dorsolateral prefrontal cortex1
esophagus1
gastric (mucosa of stomach)1
islet of Langerhans1
lung1
ovary1
right cardiac atrium1
sigmoid colon1
small intestine1
spleen1
thymus1
cell line
EndoC_BH121
early embryonic cell2
MCF-71
RCC 7860 VHL1
RCC 7860 vector1
fibroblast cell line1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)11
embryonic stem cell1
lymphocyte of B lineage (iPSC)1
stem cell
mesenchymal stem cell1
mesendoderm1
neural progenitor cell (neural stem cell)1
trophoblast1
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