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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 30pCHi-C
  • 13total RNA-seq
  • 2ATAC-seq
Assay category
  • 13Transcription
  • 2DNA accessibility
Date released
  • 559February, 2021
  • 189May, 2020
  • 173May, 2021
  • 164July, 2018
  • 123August, 2021
  • 89August, 2017
  • 65July, 2019
  • 49April, 2018
  • 45March, 2020
  • 26September, 2018
  • 25February, 2020
  • 20November, 2019
  • 16February, 2023
  • 16October, 2019
  • 15February, 2018
  • 9December, 2019
  • 5January, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
Available data
  • 45tsv
  • 20bigWig
  • 16bam
  • 12bedpe bed3+
  • 10hic
  • 3bed narrowPeak
  • 2ibed
Organism
  • 45Homo sapiens
Biosample type
  • 28tissue
  • 9cell line
  • 4in vitro differentiated cells
  • 4stem cell
Organ
  • 6pancreas
  • 5heart
  • 3epithelium
  • 3musculature of body
  • 2blood vessel
  • 2brain
  • 2connective tissue
  • 2intestine
  • 2kidney
  • 2liver
  • 2vasculature
  • 1adipose tissue
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1ovary
  • 1small intestine
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
Project
  • 43AMP
  • 2T1D
Genome assembly (visualization)
  • 15hg19
  • 13GRCh38
Lab
  • 45AMP-T2D consortium
Audit category:
  • 11inconsistent ontology term
BIOSAMPLE
ASSAY

45 results

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Clear Filters
pCHi-C
total RNA-seq
ATAC-seq
tissue
psoas muscle12
aorta11
heart left ventricle11
heart right ventricle11
liver11
cell line
EndoC_BH121
early embryonic cell2
MCF-71
RCC 7860 VHL1
RCC 7860 vector1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)11
embryonic stem cell1
lymphocyte of B lineage (iPSC)1
stem cell
mesenchymal stem cell1
mesendoderm1
neural progenitor cell (neural stem cell)1
trophoblast1
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