Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 16total RNA-seq
Assay category
  • 16Transcription
Date released
  • 559February, 2021
  • 189May, 2020
  • 173May, 2021
  • 164July, 2018
  • 123August, 2021
  • 89August, 2017
  • 65July, 2019
  • 49April, 2018
  • 45March, 2020
  • 26September, 2018
  • 25February, 2020
  • 20November, 2019
  • 16February, 2023
  • 16October, 2019
  • 15February, 2018
  • 9December, 2019
  • 5January, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
Available data
  • 250bam
  • 207bigWig
  • 189bed narrowPeak
  • 70bigBed narrowPeak
  • 49tagAlign
  • 16tsv
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 8bed bed3+
  • 4hic
  • 3bedpe bed3+
  • 1hdf5
  • 1tagAlign bed3+
  • 1tar
Organism
  • 16Homo sapiens
Biosample type
  • 8tissue
  • 4cell line
  • 2in vitro differentiated cells
  • 2primary cell
Organ
  • 6kidney
  • 4limb
  • 4nerve
  • 3epithelium
  • 2heart
  • 1brain
  • 1liver
Project
  • 16AMP
Genome assembly (visualization)
  • 16GRCh38
  • 16hg19
Lab
  • 16AMP-T2D consortium
Audit category:
  • 5inconsistent ontology term
BIOSAMPLE
ASSAY

16 results

search-icontable-tab-icon
Clear Filters
total RNA-seq
tissue
tibial nerve4
heart2
brain1
liver1
cell line
RCC 7860 HIF1a re-expression1
RCC 7860 HIF2a over-expression1
RCC 7860 vector1
glomerular visceral epithelial cell1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)1
cardiomyocytes (cardiac muscle cell)1
primary cell
kidney glomerular epithelial cell1
kidney tubule cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego