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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
227
total RNA-seq
3
small RNA-seq
2
pCHi-C
Assay category
230
Transcription
Date released
144
May, 2020
58
February, 2021
9
August, 2021
7
July, 2019
5
December, 2019
5
January, 2019
2
March, 2020
1
February, 2020
1
October, 2019
Available data
807
bam
735
bigWig
525
fastq
503
bed narrowPeak
412
bigBed narrowPeak
232
tsv
88
txt
86
tagAlign
63
bed broadPeak
63
bigBed broadPeak
13
bed bed3+
5
bed bed3
3
bed bedMethyl
3
bigBed bedMethyl
3
tar
2
bedpe bed3+
2
hic
1
csv
1
hdf5
1
vcf
Organism
232
Homo sapiens
Biosample type
212
tissue
15
cell line
5
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
0
blood
Project
232
AMP
Genome assembly (visualization)
220
GRCh38
220
hg19
Lab
223
AMP-T2D consortium
9
Bing Ren, UCSD
organ_slims!
spinal cord
BIOSAMPLE
ASSAY
232 results
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Clear Filters
total RNA-seq
small RNA-seq
pCHi-C
tissue
liver
147
1
1
bone tissue
58
right lobe of liver
3
2
cell line
HepG2
14
1
primary cell
hepatocyte
5
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