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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17total RNA-seq
  • 4small RNA-seq
  • 3single cell RNA-seq
  • 2pCHi-C
Assay category
  • 24Transcription
Target of assay
  • 3control
Date released
  • 12February, 2020
  • 11July, 2019
  • 2March, 2020
  • 1October, 2019
Available data
  • 243bam
  • 222bigWig
  • 203bed narrowPeak
  • 127bigBed narrowPeak
  • 118tagAlign
  • 47bed broadPeak
  • 38bigBed broadPeak
  • 35bed bed3+
  • 26tsv
  • 21fastq
  • 3hdf5
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed bed3
  • 1tagAlign bed3+
Organism
  • 26Homo sapiens
Biosample type
  • 23tissue
  • 3primary cell
Organ
  • 478connective tissue
  • 417pancreas
  • 401adipose tissue
  • 174liver
  • 168heart
  • 156epithelium
  • 68blood vessel
  • 68vasculature
  • 58artery
  • 58bone element
  • 26brain
  • 24kidney
  • 14embryo
  • 9musculature of body
  • 7limb
  • 5eye
  • 5nerve
  • 2intestine
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1ovary
  • 1pericardium
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
Project
  • 26AMP
Genome assembly (visualization)
  • 12GRCh38
  • 12hg19
Lab
  • 26AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

26 results

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Clear Filters
total RNA-seq
small RNA-seq
single cell RNA-seq
pCHi-C
tissue
frontal cortex21
Ammon's horn11
cerebellum2
cerebellum (Hemisphere)11
diencephalon11
primary cell
cerebellar granule cell2
Purkinje cell1
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