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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 469total RNA-seq
  • 4single cell RNA-seq
  • 3small RNA-seq
  • 2pCHi-C
Assay category
  • 476Transcription
Date released
  • 449February, 2021
  • 16July, 2019
  • 4November, 2020
  • 2April, 2018
  • 2February, 2020
  • 2July, 2018
  • 2March, 2020
  • 1May, 2021
Available data
  • 593bam
  • 570bigWig
  • 478tsv
  • 101fastq
  • 75bed narrowPeak
  • 28bigBed narrowPeak
  • 27bed bed3+
  • 22tagAlign
  • 10bed broadPeak
  • 9bigBed broadPeak
  • 6bed bed3
  • 4bed bedgraph
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 1bedpe bed3+
  • 1hdf5
Organism
  • 478Homo sapiens
Biosample type
  • 457tissue
  • 15primary cell
  • 5in vitro differentiated cells
  • 1stem cell
Organ
  • 478connective tissue
  • 417pancreas
  • 401adipose tissue
  • 174liver
  • 168heart
  • 156epithelium
  • 68blood vessel
  • 68vasculature
  • 58artery
  • 58bone element
  • 26brain
  • 24kidney
  • 14embryo
  • 9musculature of body
  • 7limb
  • 5eye
  • 5nerve
  • 2intestine
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1ovary
  • 1pericardium
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
Project
  • 478AMP
Genome assembly (visualization)
  • 474GRCh38
  • 474hg19
Lab
  • 478AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

478 results

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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
pCHi-C
tissue
adipose tissue3811
bone tissue58
subcutaneous adipose tissue71
omental fat pad51
visceral abdominal adipose tissue3
primary cell
osteoblast5
pancreatic stellate cell4
mesenchymal stem cell of adipose11
cardiac atrium fibroblast1
cardiac ventricle fibroblast1
in vitro differentiated cells
adipocyte4
cardiac fibroblast1
stem cell
mesenchymal stem cell1
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