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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
total RNA-seq
6
single cell RNA-seq
4
pCHi-C
Assay category
66
Transcription
Date released
52
February, 2021
6
August, 2021
5
July, 2019
5
March, 2020
2
February, 2020
Available data
159
bam
134
bigWig
112
bed narrowPeak
70
tsv
63
bigBed narrowPeak
15
bed broadPeak
15
bigBed broadPeak
11
bed bed3+
6
fastq
6
tagAlign
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
1
tar
Organism
70
Homo sapiens
Biosample type
52
cell line
16
tissue
2
primary cell
Organ
478
connective tissue
417
pancreas
401
adipose tissue
174
liver
168
heart
156
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
70
AMP
Genome assembly (visualization)
58
GRCh38
58
hg19
Lab
70
AMP-T2D consortium
organ_slims!
limb
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
ascending aorta
2
pulmonary artery
2
thoracic aorta
2
coronary artery
1
+ See 3 more…
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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