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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 169total RNA-seq
  • 3small RNA-seq
  • 2pCHi-C
Assay category
  • 172Transcription
Date released
  • 144May, 2020
  • 9August, 2021
  • 7July, 2019
  • 5December, 2019
  • 5January, 2019
  • 2March, 2020
  • 1February, 2020
  • 1October, 2019
Available data
  • 681bam
  • 622bigWig
  • 465fastq
  • 441bed narrowPeak
  • 358bigBed narrowPeak
  • 174tsv
  • 86tagAlign
  • 63bed broadPeak
  • 63bigBed broadPeak
  • 13bed bed3+
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 3tar
  • 2bedpe bed3+
  • 2hic
  • 1bed bed3
  • 1csv
  • 1hdf5
  • 1vcf
Organism
  • 174Homo sapiens
Biosample type
  • 154tissue
  • 15cell line
  • 5primary cell
Organ
  • 478connective tissue
  • 417pancreas
  • 401adipose tissue
  • 174liver
  • 168heart
  • 156epithelium
  • 68blood vessel
  • 68vasculature
  • 58artery
  • 58bone element
  • 26brain
  • 24kidney
  • 14embryo
  • 9musculature of body
  • 7limb
  • 5eye
  • 5nerve
  • 2intestine
  • 1adrenal gland
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1ovary
  • 1pericardium
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1thymus
  • 1urinary bladder
Project
  • 174AMP
Genome assembly (visualization)
  • 162GRCh38
  • 162hg19
Lab
  • 165AMP-T2D consortium
  • 9Bing Ren, UCSD
BIOSAMPLE
ASSAY

174 results

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Clear Filters
total RNA-seq
small RNA-seq
pCHi-C
tissue
liver14711
right lobe of liver32
cell line
HepG2141
primary cell
hepatocyte5
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