Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2637pQTL
  • 121differential activity
  • 82Fine-mapped variants
  • 54eQTL
  • 15gene expression
  • 12caQTL
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2638February, 2025
  • 110September, 2023
  • 72March, 2020
  • 38March, 2025
  • 25February, 2020
  • 21July, 2025
  • 14February, 2024
  • 2March, 2023
  • 2May, 2024
  • 1February, 2021
  • 1February, 2023
Available data
  • 4414bed bed3+
  • 2924tsv
  • 869bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 12bed bed3
  • 12bed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 2923Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 110KPMP
  • 96GTEx
  • 43STARNET
  • 20 T2DKP
  • 9DGA
  • 5AMP
  • 3CMDGA
  • 1ENCODE
Biosample type
  • 2774tissue
  • 148primary cell
  • 1cell line
  • 1in vitro differentiated cells
Organ
  • 2675vasculature
  • 2669blood vessel
  • 2641blood
  • 2641bodily fluid
  • 2635vein
  • 74epithelium
  • 56kidney
  • 48brain
  • 29connective tissue
  • 22musculature of body
  • 20adipose tissue
  • 19liver
  • 14artery
  • 12heart
  • 12limb
  • 7pancreas
  • 4nerve
  • 4spinal cord
  • 2lymphatic vessel
  • 1eye
Project
  • 2812AMP
  • 110KPMP
  • 2community
Genome assembly (visualization)
  • 106GRCh38
  • 96hg19
software_used.software.name!
  • r
BIOSAMPLE
TYPE

2924 results

search-icontable-tab-icon
Clear Filters
pQTL
differential activity
Fine-mapped variants
eQTL
gene expression
caQTL
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood2635
subcutaneous adipose tissue2431
aorta wall2121
blood serum222
liver2121
primary cell
hepatocyte5
macrophage131
endothelial cell of hepatic sinusoid4
foam cell12
Adaptive / Maladaptive / Repairing Fibroblast2
cell line
EndoC_BH11
in vitro differentiated cells
myocyte1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego