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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
33
single cell RNA-seq
22
snATAC-seq
6
total RNA-seq
1
MPRA
Assay category
61
DNA accessibility
41
DNA methylation
39
Transcription
Date released
141
May, 2022
89
February, 2021
57
August, 2021
19
September, 2020
7
February, 2023
1
October, 2022
Available data
134
zippedFastqFolder
38
bed narrowPeak
24
bam
24
fastq
20
bigWig
8
txt
3
bedpe bed3+
3
cool
3
hic
1
bed bed3+
Organism
141
Homo sapiens
Biosample type
134
primary cell
7
tissue
1
cell line
Organ
86
pancreas
80
epithelium
1
musculature of body
Project
134
HPAP
8
AMP
Genome assembly (visualization)
1
hg19
Lab
134
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
1
audit script error
BIOSAMPLE
ASSAY
142 results
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WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
total RNA-seq
MPRA
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
tissue
islet of Langerhans
6
skeletal muscle tissue
1
cell line
MIN6
1
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