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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
total RNA-seq
8
single cell RNA-seq
3
ATAC-seq
Assay category
57
Transcription
3
DNA accessibility
Date released
57
August, 2021
3
February, 2023
Available data
171
fastq
153
zippedFastqFolder
142
bed narrowPeak
90
bigWig
64
xls
60
txt
16
tsv
7
hic
5
bedpe bed3+
3
bed bedgraph
3
cool
2
bed bed3+
2
bed broadPeak
1
bam
1
bedpe
1
vcf
Organism
60
Homo sapiens
Biosample type
57
tissue
3
in vitro differentiated cells
Organ
57
kidney
Project
60
AMP
Genome assembly (visualization)
3
hg19
Lab
AMP-T2D consortium
57
Katalin Susztak, Upenn
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
lab.title!
AMP-T2D consortium
Kyle Gaulton, UCSD
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
60 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
tissue
kidney
49
8
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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