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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
5
single cell RNA-seq
4
total RNA-seq
1
MPRA
1
snATAC-seq
Assay category
9
Transcription
1
DNA accessibility
Date released
89
February, 2021
4
February, 2023
1
May, 2022
1
October, 2022
Available data
2726
bam
2407
bigWig
1430
tsv
1113
bed narrowPeak
1053
fastq
874
bigBed narrowPeak
287
bed broadPeak
267
bigBed broadPeak
252
bed bed3+
174
tagAlign
95
txt
36
bed bedMethyl
36
bigBed bedMethyl
18
bedpe bed3+
16
hic
12
bed bed3
8
csv
5
hdf5
4
bed bedgraph
4
tar
2
ibed
Organism
94
Homo sapiens
Biosample type
94
tissue
1
cell line
Organ
88
bone element
5
kidney
4
skeleton
1
musculature of body
Project
95
AMP
Genome assembly (visualization)
1
hg19
Lab
95
AMP-T2D consortium
57
Katalin Susztak, Upenn
6
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
84
inconsistent ontology term
6
audit script error
organ_slims!
artery
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
95 results
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RNA microarray
single cell RNA-seq
total RNA-seq
MPRA
snATAC-seq
tissue
bone element
84
kidney
5
acetabular part of hip bone
1
ilium
1
ischium
1
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cell line
MIN6
1
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