Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
3
ATAC-seq
1
MPRA
1
snATAC-seq
Assay category
10
Transcription
4
DNA accessibility
Date released
February, 2021
August, 2021
7
February, 2023
7
May, 2022
1
October, 2022
Available data
2663
bam
2480
bigWig
1602
bed narrowPeak
1313
fastq
958
bigBed narrowPeak
911
tsv
366
tagAlign
286
bed broadPeak
249
bigBed broadPeak
230
bed bed3+
153
zippedFastqFolder
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
21
hic
15
txt
10
bed bed3
5
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
14
Homo sapiens
Biosample type
11
tissue
3
in vitro differentiated cells
1
cell line
Organ
6
pancreas
4
bone element
4
skeleton
1
musculature of body
Project
15
AMP
Genome assembly (visualization)
4
hg19
Lab
6
AMP-T2D consortium
6
Kyle Gaulton, UCSD
3
Struan F.A. Grant, CHOP
Audit category:
1
audit script error
1
inconsistent ontology term
month_released!
August, 2021
February, 2021
organ_slims!
limb
BIOSAMPLE
ASSAY
15 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
MPRA
snATAC-seq
tissue
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
+ See 1 more…
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
cell line
MIN6
1
See all biosamples
Download