Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84RNA microarray
  • 59total RNA-seq
  • 13single cell RNA-seq
  • 1MPRA
Assay category
  • 72Transcription
Date released
  • 89February, 2021
  • 57August, 2021
  • 6May, 2022
  • 4February, 2023
  • 1October, 2022
Available data
  • 1478tsv
  • 1342bam
  • 1337bigWig
  • 373fastq
  • 157txt
  • 52zippedFastqFolder
  • 8csv
  • 7tagAlign
  • 6bed broadPeak
  • 6bed narrowPeak
  • 6bigBed narrowPeak
  • 2bed bed3+
Organism
  • 156Homo sapiens
Biosample type
  • 156tissue
  • 1cell line
Organ
  • 88bone element
  • 62kidney
  • 6pancreas
  • 4skeleton
Project
  • 157AMP
Lab
  • 94AMP-T2D consortium
  • 57Katalin Susztak, Upenn
  • 6Kyle Gaulton, UCSD
Audit category:
  • 84inconsistent ontology term
  • 5audit script error
replicates.library.nucleic_acid_term_name!
  • DNA
BIOSAMPLE
ASSAY

157 results

search-icontable-tab-icon
Clear Filters
RNA microarray
total RNA-seq
single cell RNA-seq
MPRA
tissue
bone element84
kidney4913
islet of Langerhans6
acetabular part of hip bone1
ilium1
cell line
MIN61
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego