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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
ATAC-seq
1
snATAC-seq
Assay category
4
DNA accessibility
4
Transcription
Date released
7
February, 2023
1
May, 2022
Available data
1159
bam
1078
bigWig
728
bed narrowPeak
630
fastq
529
bigBed narrowPeak
371
tsv
142
tagAlign
125
bed broadPeak
123
bigBed broadPeak
107
bed bed3+
20
bed bedMethyl
20
bigBed bedMethyl
13
bedpe bed3+
12
hic
8
txt
7
bed bed3
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
8
Homo sapiens
Biosample type
5
tissue
3
in vitro differentiated cells
Organ
4
bone element
4
skeleton
1
musculature of body
Project
8
AMP
Genome assembly (visualization)
4
hg19
Lab
5
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
audit script error
1
inconsistent ontology term
replication_type!
unreplicated
BIOSAMPLE
ASSAY
8 results
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total RNA-seq
ATAC-seq
snATAC-seq
tissue
acetabular part of hip bone
1
ilium
1
ischium
1
pubis
1
skeletal muscle tissue
1
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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