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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
51
Transcription
41
DNA methylation
Date released
134
May, 2022
18
September, 2020
Available data
2710
bam
2511
bigWig
1654
bed narrowPeak
fastq
1122
tsv
933
bigBed narrowPeak
376
tagAlign
312
bed broadPeak
bigBed broadPeak
246
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
152
Homo sapiens
Biosample type
152
primary cell
Organ
80
epithelium
80
pancreas
Project
152
HPAP
Lab
152
Klaus Kaestner, Upenn
files.file_type!
bigBed broadPeak
fastq
organ_slims!
connective tissue
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
152 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
51
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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