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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
51
single cell RNA-seq
41
WGBS
39
ATAC-seq
21
snATAC-seq
Assay category
60
DNA accessibility
51
Transcription
41
DNA methylation
Date released
134
May, 2022
18
September, 2020
Available data
2906
bam
2677
bigWig
1543
bed narrowPeak
1415
tsv
fastq
1000
bigBed narrowPeak
281
bed broadPeak
270
bigBed broadPeak
238
bed bed3+
229
tagAlign
155
txt
153
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
152
Homo sapiens
Biosample type
152
primary cell
Organ
80
epithelium
80
pancreas
Project
152
HPAP
Lab
152
Klaus Kaestner, Upenn
files.file_type!
fastq
lab.title!
Kyle Gaulton, UCSD
month_released!
August, 2017
BIOSAMPLE
ASSAY
152 results
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single cell RNA-seq
WGBS
ATAC-seq
snATAC-seq
primary cell
Langerhans cell
51
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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