Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 52single cell RNA-seq
  • 39ATAC-seq
  • 21snATAC-seq
Assay category
  • 60DNA accessibility
  • 52Transcription
Date released
  • 93May, 2022
  • 19September, 2020
Available data
  • 3367bam
  • 3151bigWig
  • 1800bed narrowPeak
  • 1601tsv
  • 1326fastq
  • 1034bigBed narrowPeak
  • 393tagAlign
  • 315bed broadPeak
  • 280bigBed broadPeak
  • 270bed bed3+
  • 161txt
  • 112zippedFastqFolder
  • 64xls
  • 36bed bedMethyl
  • 36bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1tbi
  • 1vcf
Organism
  • 112Homo sapiens
Biosample type
  • 112primary cell
Organ
  • 39epithelium
  • 39pancreas
Project
  • 112HPAP
Lab
  • 112Klaus Kaestner, Upenn
files.platform.term_name!
  • Illumina Genome Analyzer II
BIOSAMPLE
ASSAY

112 results

search-icontable-tab-icon
Clear Filters
single cell RNA-seq
ATAC-seq
snATAC-seq
primary cell
Langerhans cell5221
pancreatic alpha cell22
pancreatic beta cell13
pancreatic acinar cell4
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego