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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
single cell RNA-seq
4
ChIP-seq
2
total RNA-seq
Assay category
55
Transcription
4
DNA binding
Target of assay
4
chromatin remodeller
4
transcription factor
2
RNA binding protein
Date released
27
April, 2018
16
July, 2018
9
September, 2020
2
August, 2018
2
December, 2018
2
January, 2019
1
June, 2018
Available data
50
bam
50
bigWig
50
fastq
46
tsv
9
zippedFastqFolder
4
bed narrowPeak
4
bigBed narrowPeak
Organism
59
Homo sapiens
Biosample type
47
primary cell
8
tissue
4
cell line
Organ
39
pancreas
32
epithelium
4
blood
4
bodily fluid
1
connective tissue
Project
50
AMP
9
HPAP
Genome assembly (visualization)
50
GRCh38
50
hg19
Lab
50
AMP-T2D consortium
9
Klaus Kaestner, Upenn
Audit category:
1
inconsistent control
files.platform.term_name!
Applied Biosystems SOLiD System 3 Plus
BIOSAMPLE
ASSAY
59 results
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single cell RNA-seq
ChIP-seq
total RNA-seq
primary cell
Langerhans cell
9
pancreatic alpha cell
6
pancreatic beta cell
6
pancreatic delta cell
6
pancreatic acinar cell
4
+ See 6 more…
tissue
islet of Langerhans
6
2
cell line
GM12878
4
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