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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 101ChIP-seq
Assay category
  • 101DNA binding
Target of assay
  • 979histone modification
  • 978histone
  • 494narrow histone mark
  • 483broad histone mark
  • 462transcription factor
  • 328control
  • 101RNA binding protein
  • 89recombinant protein
  • 35chromatin remodeller
  • 5nucleotide modification
  • 4other context
  • 4other post-translational modification
Date released
  • 31November, 2017
  • 21November, 2018
  • 10October, 2018
  • 6January, 2019
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4December, 2017
  • 4June, 2019
  • 2August, 2017
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 93bigWig
  • 92bed narrowPeak
  • 90bam
  • 85bigBed narrowPeak
  • 76fastq
  • 7bed broadPeak
  • 7bigBed broadPeak
  • 1bed bed3+
Organism
  • 101Homo sapiens
Biosample type
  • 60cell line
  • 26tissue
  • 8primary cell
  • 7in vitro differentiated cells
Organ
  • 53liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 8epithelium
  • 7pancreas
  • 6connective tissue
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3kidney
  • 2brain
  • 1artery
  • 1eye
Project
  • 101AMP
Genome assembly (visualization)
  • 89GRCh38
  • 87hg19
Lab
  • 90AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 3missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
files.platform.term_name!
  • Illumina Genome Analyzer
BIOSAMPLE
ASSAY

101 results

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Clear Filters
ChIP-seq
cell line
HepG249
GM1287810
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
subcutaneous adipose tissue2
primary cell
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
in vitro differentiated cells
embryonic stem cell5
hepatocyte2
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