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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 187DNase-seq
  • 31ChIP-seq
Assay category
  • 187DNA accessibility
  • 31DNA binding
Target of assay
  • 19histone
  • 19histone modification
  • 11narrow histone mark
  • 8broad histone mark
  • 8control
  • 4RNA binding protein
  • 4transcription factor
Date released
  • 715February, 2021
  • 401November, 2017
  • 399May, 2021
  • 398August, 2017
  • 341May, 2020
  • 319August, 2021
  • 314October, 2019
  • 218June, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 88November, 2018
  • 80April, 2019
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 30January, 2019
  • 25February, 2020
  • 19April, 2020
  • 19October, 2017
  • 16January, 2021
  • 16November, 2020
  • 15May, 2023
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 7September, 2017
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 218bam
  • 210bed narrowPeak
  • 210bigBed narrowPeak
  • 210bigWig
  • 187bed bed3+
  • 187bed broadPeak
  • 187bigBed broadPeak
Organism
  • 218Homo sapiens
Biosample type
  • 163tissue
  • 55primary cell
Organ
  • 81kidney
  • 43musculature of body
  • 35heart
  • 32limb
  • 30brain
  • 20epithelium
  • 18connective tissue
  • 18ureter
  • 7eye
  • 7vasculature
  • 5blood vessel
  • 4pancreas
  • 2artery
  • 2liver
  • 1adipose tissue
Project
  • 218AMP
Genome assembly (visualization)
  • 210GRCh38
  • 187hg19
Lab
  • 218AMP-T2D consortium
Audit category:
  • 26inconsistent ontology term
files.platform.term_name!
  • Illumina Genome Analyzer II
BIOSAMPLE
ASSAY

218 results

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Clear Filters
DNase-seq
ChIP-seq
tissue
heart18
muscle of arm17
kidney13
muscle of leg13
brain12
renal cortex interstitium11
renal pelvis10
right kidney10
left kidney9
left renal cortex interstitium4
left renal pelvis4
right renal pelvis4
heart left ventricle3
retina3
right renal cortex interstitium3
body of pancreas2
coronary artery2
frontal cortex2
pancreas2
right atrium auricular region2
Ammon's horn1
ascending aorta1
caudate nucleus1
cerebellar cortex1
cerebellum (Hemisphere)1
forelimb muscle1
globus pallidus1
heart right ventricle1
hindlimb muscle1
inferior parietal cortex1
left cardiac atrium1
medulla oblongata1
midbrain1
middle frontal gyrus1
occipital lobe1
omental fat pad1
pons1
putamen1
superior temporal gyrus1
primary cell
cardiac fibroblast35
skeletal muscle satellite cell8
mesenchymal stem cell7
cardiac muscle cell13
epithelial cell of proximal tubule13
retinal pigment epithelial cell13
skeletal muscle cell12
glomerular visceral epithelial cell2
kidney tubule cell2
astrocyte of the cerebellum1
astrocyte of the hippocampus1
brain microvascular endothelial cell1
brain pericyte1
choroid plexus epithelial cell1
glomerular endothelial cell1
hepatic stellate cell1
hepatocyte1
kidney capillary endothelial cell1
kidney epithelial cell1
kidney glomerular epithelial cell1
renal cortical epithelial cell1
smooth muscle cell of the brain vasculature1
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