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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 193total RNA-seq
  • 42WGBS
  • 10ChIP-seq
Assay category
  • 193Transcription
  • 42DNA methylation
  • 10DNA binding
Target of assay
  • 10transcription factor
  • 1RNA binding protein
Date released
  • 92August, 2017
  • 76February, 2023
  • 41May, 2022
  • 26September, 2018
  • 5November, 2018
  • 2November, 2017
  • 2October, 2018
  • 1December, 2018
Available data
  • 204fastq
  • 128bam
  • 128bigWig
  • 117tsv
  • 41zippedFastqFolder
  • 7bed narrowPeak
  • 7bigBed narrowPeak
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 245Homo sapiens
Biosample type
  • 145primary cell
  • 93tissue
  • 7cell line
Organ
  • 196pancreas
  • 106epithelium
  • 4blood
  • 4bodily fluid
  • 3adipose tissue
  • 3connective tissue
  • 3liver
Project
  • 128AMP
  • 117HPAP
Genome assembly (visualization)
  • 128GRCh38
  • 127hg19
Lab
  • 128AMP-T2D consortium
  • 117Klaus Kaestner, Upenn
Audit category:
  • 3missing controlled_by
files.platform.term_name!
  • Illumina Genome Analyzer IIx
BIOSAMPLE
ASSAY

245 results

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Clear Filters
total RNA-seq
WGBS
ChIP-seq
primary cell
pancreatic alpha cell3725
exocrine cell39
pancreatic beta cell2016
pancreatic acinar cell4
pancreatic ductal cell4
tissue
islet of Langerhans89
white adipose tissue3
pancreas1
cell line
GM128784
HepG23
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