Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
28
single cell RNA-seq
23
ATAC-seq
23
total RNA-seq
5
WGBS
Assay category
75
DNA binding
51
Transcription
23
DNA accessibility
5
DNA methylation
Target of assay
54
transcription factor
18
control
12
RNA binding protein
1
chromatin remodeller
Date released
29
December, 2018
24
May, 2022
20
October, 2018
18
September, 2020
17
April, 2018
9
November, 2017
8
July, 2018
8
November, 2018
6
August, 2017
6
January, 2019
4
December, 2017
3
October, 2017
1
February, 2018
1
June, 2018
Available data
152
fastq
134
bam
92
bigWig
80
bed narrowPeak
59
bigBed narrowPeak
27
tsv
6
txt
3
bed bedMethyl
3
bigBed bedMethyl
2
zippedFastqFolder
Organism
154
Homo sapiens
Biosample type
65
tissue
44
cell line
44
primary cell
1
in vitro differentiated cells
Organ
71
pancreas
34
blood
34
bodily fluid
34
epithelium
16
liver
14
adipose tissue
14
connective tissue
8
spleen
Project
136
AMP
18
HPAP
Genome assembly (visualization)
107
hg19
92
GRCh38
Lab
112
AMP-T2D consortium
24
Kyle Gaulton, UCSD
18
Klaus Kaestner, Upenn
files.platform.term_name!
Illumina HiSeq 2000
BIOSAMPLE
ASSAY
154 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
single cell RNA-seq
ATAC-seq
total RNA-seq
WGBS
tissue
islet of Langerhans
18
6
body of pancreas
11
1
spleen
7
1
omental fat pad
6
1
right lobe of liver
4
1
+ See 4 more…
cell line
GM12878
34
HepG2
10
primary cell
pancreatic alpha cell
4
15
pancreatic beta cell
4
1
mesenchymal cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
in vitro differentiated cells
endocrine cell
1
See all biosamples
Download