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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
28
single cell RNA-seq
23
ATAC-seq
23
total RNA-seq
11
WGBS
Assay category
75
DNA binding
51
Transcription
23
DNA accessibility
11
DNA methylation
Target of assay
54
transcription factor
18
control
12
RNA binding protein
1
chromatin remodeller
Date released
29
December, 2018
24
May, 2022
20
October, 2018
18
September, 2020
17
April, 2018
9
November, 2017
8
July, 2018
8
November, 2018
6
August, 2017
6
February, 2021
6
January, 2019
4
December, 2017
3
October, 2017
1
February, 2018
1
June, 2018
Available data
158
fastq
134
bam
92
bigWig
80
bed narrowPeak
59
bigBed narrowPeak
33
tsv
6
txt
3
bed bedMethyl
3
bigBed bedMethyl
2
zippedFastqFolder
Organism
160
Homo sapiens
Biosample type
65
tissue
50
primary cell
44
cell line
1
in vitro differentiated cells
Organ
77
pancreas
40
epithelium
34
blood
34
bodily fluid
16
liver
14
adipose tissue
14
connective tissue
8
spleen
Project
136
AMP
24
HPAP
Genome assembly (visualization)
107
hg19
92
GRCh38
Lab
112
AMP-T2D consortium
24
Klaus Kaestner, Upenn
24
Kyle Gaulton, UCSD
files.platform.term_name!
Illumina HiSeq 2000
BIOSAMPLE
ASSAY
160 results
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ChIP-seq
single cell RNA-seq
ATAC-seq
total RNA-seq
WGBS
tissue
islet of Langerhans
18
6
body of pancreas
11
1
spleen
7
1
omental fat pad
6
1
right lobe of liver
4
1
+ See 4 more…
primary cell
pancreatic alpha cell
4
15
6
pancreatic beta cell
4
1
mesenchymal cell
4
pancreatic cell
4
pancreatic delta cell
3
+ See 4 more…
cell line
GM12878
34
HepG2
10
in vitro differentiated cells
endocrine cell
1
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