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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 21ChIP-seq
Assay category
  • 21DNA binding
Target of assay
  • 17transcription factor
  • 15RNA binding protein
  • 2control
  • 2histone
  • 2histone modification
  • 1broad histone mark
  • 1narrow histone mark
Date released
  • 11November, 2017
  • 6November, 2018
  • 2August, 2017
  • 2February, 2018
Available data
  • 21bam
  • 21fastq
  • 19bed narrowPeak
  • 19bigWig
  • 15bigBed narrowPeak
  • 2bed bed3+
Organism
  • 21Homo sapiens
Biosample type
  • 17cell line
  • 4in vitro differentiated cells
Organ
  • 17liver
  • 2connective tissue
Project
  • 21AMP
Genome assembly (visualization)
  • 19GRCh38
  • 18hg19
Lab
  • 21AMP-T2D consortium
Audit category:
  • 3inconsistent control read length
files.platform.term_name!
  • Illumina HiSeq 2000
BIOSAMPLE
ASSAY

21 results

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ChIP-seq
cell line
HepG217
in vitro differentiated cells
adipocyte2
definitive endodermal cell2
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